For a brand new installation I dont see an issue to replace them but be aware that checkmk is acting as a certificate authority. I guess your security dpt will not be open to deploy you an intermediate CA.
Our certificates need at least 4096 bits of entropy, and use elliptic curve instead of RSA. They can be valid for up to 1 year. In our test environment I am running 2.2.0p1, here is is only possible to adjust the lifetime. All other parameters are our of our control.
There is no need for the certificate to be signed by our root CA. as long as the site and the agents trust each other everything is fine (like it is doing with the original certs). The main issue is that the current certificates are not secure enough by our standards.
We do not have a brand new installation, and moving the files around already bricked the agent registration.
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